A set of SPARQL examples that are used in LOTUS
Chemicals with isomeric SMILES but no canonical SMILES.
PREFIX wd: <http://www.wikidata.org/entity/>
PREFIX wdt: <http://www.wikidata.org/prop/direct/>
#title: Chemicals with isomeric SMILES but no canonical SMILES
SELECT ?structure ?smiles_isomeric WHERE {
VALUES ?classes {
wd:Q113145171
wd:Q59199015
}
?structure wdt:P2017 ?smiles_isomeric.
?structure wdt:P31 ?classes.
OPTIONAL { ?structure wdt:P233 ?smiles_canonical. }
FILTER(!(BOUND(?smiles_canonical)))
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v2("?classes")
v1("?smiles_canonical")
v4("?smiles_isomeric"):::projected
v3("?structure"):::projected
f0[["not bound(?smiles_canonical)"]]
f0 --> v1
bind1[/VALUES ?classes/]
bind1-->v2
bind10(["wd:Q113145171"])
bind10 --> bind1
bind11(["wd:Q59199015"])
bind11 --> bind1
v3 --"wdt:P2017"--> v4
v3 --"wdt:P31"--> v2
subgraph optional0["(optional)"]
style optional0 fill:#bbf,stroke-dasharray: 5 5;
v3 -."wdt:P233".-> v1
end